Transcript: lnc-GGCT-1:52

Basic information

LNCipedia transcript ID: lnc-GGCT-1:52 
LNCipedia gene ID: lnc-GGCT-1
Location (hg38): chr7:30576527-30579320
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1655 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1258:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.8234 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:52 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GGCT-1:52
4.1 lnc-GGCT-1:52
5.0 lnc-GGCT-1:52
5.1 lnc-PDE1C-13:41
5.2 lnc-GGCT-1:52