Transcript: lnc-GGCT-1:82

Basic information

LNCipedia transcript ID: lnc-GGCT-1:82 
LNCipedia gene ID: lnc-GGCT-1
Location (hg38): chr7:30510689-30579429
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 22735 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196295.7|ENCT00000410539.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 28.535 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:82 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GGCT-1:82
5.0 lnc-GGCT-1:82
5.1 lnc-PDE1C-13:37
5.2 lnc-GGCT-1:82