Transcript: lnc-GGCT-1:86

Basic information

LNCipedia transcript ID: lnc-GGCT-1:86 
LNCipedia gene ID: lnc-GGCT-1
Location (hg38): chr7:30552140-30573122
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1259 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196295.7|FTMT22500001696.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.0855 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:86 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GGCT-1:86
5.0 lnc-GGCT-1:86
5.1 lnc-PDE1C-13:53
5.2 lnc-GGCT-1:86