Transcript: lnc-GGT2-26:1

Basic information

LNCipedia transcript ID: lnc-GGT2-26:1 
LNCipedia gene ID: lnc-GGT2-26
RefSeq ID: NR_136559
Location (hg38): chr22:21301260-21326636
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2837 bp
Exons: 12
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136559.1
Alternative gene names: LOC100996335


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 608.1077 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GGT2-26:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SCARF2-26:1
5.1 lnc-SCARF2-26:1
5.2 lnc-GGT2-26:1