Transcript: lnc-GINS1-13:4

Basic information

LNCipedia transcript ID: lnc-GINS1-13:4 
LNCipedia gene ID: lnc-GINS1-13
Location (hg38): chr20:26208220-26211028
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1981 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052968.1|HBMT00000884614.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.8378 non-coding 
CPAT coding probability 4.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GINS1-13:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM182A-7:4
5.0 lnc-FAM182A-7:4
5.1 lnc-CST8-51:4
5.2 lnc-GINS1-13:4