Transcript: lnc-GINS1-13:6

Basic information

LNCipedia transcript ID: lnc-GINS1-13:6 
LNCipedia gene ID: lnc-GINS1-13
Location (hg38): chr20:26209156-26248449
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 859 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052968.1|FTMT27900010789.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.4712 non-coding 
CPAT coding probability 9.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GINS1-13:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM182A-7:6
5.0 lnc-FAM182A-7:6
5.1 lnc-CST8-51:6
5.2 lnc-GINS1-13:6