Transcript: lnc-GINS2-3:1

Basic information

LNCipedia transcript ID: lnc-GINS2-3:1 
LNCipedia gene ID: lnc-GINS2-3
Location (hg38): chr16:85400331-85401240
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 679 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024751; NONHSAT144122
Alternative gene names: XLOC_012036; linc-FAM92B-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.9239 non-coding 
CPAT coding probability 9.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GINS2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GINS2-3:1
3.1 lnc-GINS2-3:1
4.0 lnc-GINS2-3:1
4.1 lnc-GINS2-3:1
5.0 lnc-GINS2-3:1
5.1 lnc-MTHFSD-22:1
5.2 lnc-GINS2-3:1