Transcript: lnc-GIPC3-3:2

Basic information

LNCipedia transcript ID: lnc-GIPC3-3:2 
LNCipedia gene ID: lnc-GIPC3-3
Location (hg38): chr19:3606920-3609394
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2475 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226800.5|MICT00000166335.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.5887 non-coding 
CPAT coding probability 19.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GIPC3-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CACTIN-AS1:8
5.0 CACTIN-AS1:8
5.1 lnc-RPL36-197:2
5.2 lnc-GIPC3-3:2