Transcript: lnc-GJA10-6:1

Basic information

LNCipedia transcript ID: lnc-GJA10-6:1 
LNCipedia gene ID: lnc-GJA10-6
Location (hg38): chr6:92211934-92246194
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011888; NONHSAT114004
Alternative gene names: XLOC_005387; linc-MANEA-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.5952 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GJA10-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GJA10-4:1
3.1 lnc-GJA10-6:1
4.0 lnc-GJA10-6:1
4.1 lnc-GJA10-6:1
5.0 lnc-GJA10-6:1
5.1 lnc-PM20D2-31:2
5.2 lnc-GJA10-6:1