Transcript: lnc-GJA9-1:10

Basic information

LNCipedia transcript ID: lnc-GJA9-1:10 
LNCipedia gene ID: lnc-GJA9-1
Location (hg38): chr1:38839349-38848074
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2492 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT002522
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 840.1593 coding 
CPAT coding probability 18.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GJA9-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYCBP-2:1
4.0 lnc-GJA9-1:10
4.1 lnc-GJA9-1:10
5.0 lnc-GJA9-1:10
5.1 lnc-PABPC4-9:10
5.2 lnc-GJA9-1:10