Transcript: lnc-GJA9-1:5

Basic information

LNCipedia transcript ID: lnc-GJA9-1:5 
LNCipedia gene ID: lnc-GJA9-1
RefSeq ID: NR_037636
Location (hg38): chr1:38862490-38881626
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2599 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037636; NR_037636.1
Alternative gene names: GJA9-MYCBP


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.2015 non-coding 
CPAT coding probability 3.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GJA9-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYCBP-1:3
4.0 lnc-GJA9-1:5
4.1 lnc-GJA9-1:5
5.0 lnc-GJA9-1:5
5.1 lnc-PABPC4-9:3
5.2 lnc-GJA9-1:5