Transcript: lnc-GK3P-1:2

Basic information

LNCipedia transcript ID: lnc-GK3P-1:2 
LNCipedia gene ID: lnc-GK3P-1
Location (hg38): chr4:165749865-165757637
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7773 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000074444.1|FTMT21400009781.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.2062 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GK3P-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM192-1:3
5.0 lnc-TMEM192-1:3
5.1 lnc-TRIM61-10:2
5.2 lnc-GK3P-1:2