Transcript: lnc-GK3P-1:4

Basic information

LNCipedia transcript ID: lnc-GK3P-1:4 
LNCipedia gene ID: lnc-GK3P-1
RefSeq ID: NR_121677
Location (hg38): chr4:165730779-165743071
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1555 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121677; NR_121677.1
Alternative gene names: LOC101928131


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.1116 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GK3P-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM192-1:2
4.0 lnc-TMEM192-1:2
4.1 lnc-TMEM192-1:2
5.0 lnc-TMEM192-1:2
5.1 lnc-TRIM61-10:4
5.2 lnc-GK3P-1:4