Transcript: lnc-GLB1L2-1:19

Basic information

LNCipedia transcript ID: lnc-GLB1L2-1:19 
LNCipedia gene ID: lnc-GLB1L2-1
Ensembl Gene ID: ENSG00000255545
Ensembl Transcript ID: ENST00000532886
Location (hg38): chr11:134479299-134505661
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4435 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT025273; ENST00000532886.2
Alternative gene names: ENSG00000255545.3; RP11-627G23.1; ENSG00000255545.7; AP004608.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.5447 non-coding 
CPAT coding probability 59.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GLB1L2-1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLB1L2-1:19
4.0 lnc-GLB1L2-1:19
4.1 lnc-GLB1L2-1:19
5.0 lnc-GLB1L2-1:19
5.1 lnc-GLB1L3-5:20
5.2 lnc-GLB1L2-1:19