Transcript: lnc-GLRX5-6:2

Basic information

LNCipedia transcript ID: lnc-GLRX5-6:2 
LNCipedia gene ID: lnc-GLRX5-6
Ensembl Gene ID: ENSG00000258572
Ensembl Transcript ID: ENST00000554161
Location (hg38): chr14:95516136-95517911
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 993 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554161.1
Alternative gene names: ENSG00000258572.1; RP11-1070N10.3; AL133467.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -101.8092 non-coding 
CPAT coding probability 17.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GLRX5-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-1070N10.3.1-6:1
4.1 lnc-RP11-1070N10.3.1-6:1
5.0 lnc-RP11-1070N10.3.1-6:1
5.1 lnc-GLRX5-6:1
5.2 lnc-GLRX5-6:2