Transcript: lnc-GMFB-3:2

Basic information

LNCipedia transcript ID: lnc-GMFB-3:2 
LNCipedia gene ID: lnc-GMFB-3
Location (hg38): chr14:54563300-54565867
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2568 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000021165.1|FTMT25400003000.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -79.0252 non-coding 
CPAT coding probability 23.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GMFB-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GMFB-3:2
5.0 lnc-GMFB-3:2
5.1 lnc-RTN1-59:2
5.2 lnc-GMFB-3:2