Transcript: lnc-GNAO1-1:5

Basic information

LNCipedia transcript ID: lnc-GNAO1-1:5 
LNCipedia gene ID: lnc-GNAO1-1
Location (hg38): chr16:56111793-56136763
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 335 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024854; NONHSAT142650
Alternative gene names: XLOC_011734; linc-GNAO1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.2994 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNAO1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GNAO1-1:4
3.1 lnc-GNAO1-1:5
4.0 lnc-GNAO1-1:5
4.1 lnc-GNAO1-1:5
5.0 lnc-GNAO1-1:5
5.1 lnc-ADGRG1-62:6
5.2 lnc-GNAO1-1:5