Transcript: lnc-GNAQ-2:3

Basic information

LNCipedia transcript ID: lnc-GNAQ-2:3 
LNCipedia gene ID: lnc-GNAQ-2
Location (hg38): chr9:79135435-79138718
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 458 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016366; NONHSAT132002
Alternative gene names: XLOC_007745; linc-GNAQ-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.7522 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNAQ-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GNAQ-2:1
3.1 lnc-GNAQ-2:3
4.0 lnc-GNAQ-2:3
4.1 lnc-GNAQ-2:3
5.0 lnc-GNAQ-2:3
5.1 lnc-ALDH1A1-40:5
5.2 lnc-GNAQ-2:3