Transcript: lnc-GNAQ-2:7

Basic information

LNCipedia transcript ID: lnc-GNAQ-2:7 
LNCipedia gene ID: lnc-GNAQ-2
Location (hg38): chr9:79135434-79138718
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT132000; FPKM1_group_33272_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.7522 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNAQ-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GNAQ-2:7
4.0 lnc-GNAQ-2:7
4.1 lnc-GNAQ-2:7
5.0 lnc-GNAQ-2:7
5.1 lnc-ALDH1A1-40:7
5.2 lnc-GNAQ-2:7