Transcript: lnc-GNG2-1:1

Basic information

LNCipedia transcript ID: lnc-GNG2-1:1 
LNCipedia gene ID: lnc-GNG2-1
Ensembl Gene ID: ENSG00000258535
Ensembl Transcript ID: ENST00000553312
Location (hg38): chr14:51765276-51825422
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5982 bp
Exons: 10
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553312; ENST00000553312.1; RP11-280K24.4-001; OTTHUMT00000411576.1; NONHSAT036860
Alternative gene names: ENSG00000258535; RP11-280K24.4; ENSG00000258535.1; OTTHUMG00000171080.1; AL079307.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3077 non-coding 
CPAT coding probability 2.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNG2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GNG2-1:2
3.1 lnc-GNG2-1:1
4.0 lnc-GNG2-1:1
4.1 lnc-GNG2-1:1
5.0 lnc-GNG2-1:1
5.1 lnc-AP5M1-78:2
5.2 lnc-GNG2-1:1