Transcript: lnc-GNG5-1:11

Basic information

LNCipedia transcript ID: lnc-GNG5-1:11 
LNCipedia gene ID: lnc-GNG5-1
Location (hg38): chr1:84365048-84365733
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 593 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001549; NONHSAT004198
Alternative gene names: XLOC_000892; linc-TTLL7-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -239.0371 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNG5-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GNG5-3:2
3.1 lnc-GNG5-3:2
4.0 lnc-GNG5-3:2
4.1 lnc-GNG5-1:11
5.0 lnc-GNG5-1:11
5.1 lnc-RBMXL1-52:11
5.2 lnc-GNG5-1:11