Transcript: lnc-GNRH1-3:2

Basic information

LNCipedia transcript ID: lnc-GNRH1-3:2 
LNCipedia gene ID: lnc-GNRH1-3
Location (hg38): chr8:25440624-25458280
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 400 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT125626
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 53.715 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GNRH1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GNRH1-3:2
4.0 lnc-GNRH1-3:2
4.1 lnc-GNRH1-3:2
5.0 lnc-GNRH1-3:2
5.1 lnc-ENTPD4-17:2
5.2 lnc-GNRH1-3:2