Transcript: lnc-GOLGA6B-1:3

Basic information

LNCipedia transcript ID: lnc-GOLGA6B-1:3 
LNCipedia gene ID: lnc-GOLGA6B-1
Ensembl Gene ID: ENSG00000260534
Ensembl Transcript ID: ENST00000566291
Location (hg38): chr15:72589691-72591845
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2155 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000566291.1; RP11-1006G14.4-001; OTTHUMT00000431955.1; NONHSAT047105
Alternative gene names: ENSG00000260534.1; RP11-1006G14.4; OTTHUMG00000176421.1; AC100827.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.1743 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA6B-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARIH1-1:1
4.0 lnc-ARIH1-1:1
4.1 lnc-ARIH1-1:1
5.0 lnc-ARIH1-1:1
5.1 lnc-GOLGA6B-1:2
5.2 lnc-GOLGA6B-1:3