Transcript: lnc-GOLGA8J-3:2

Basic information

LNCipedia transcript ID: lnc-GOLGA8J-3:2 
LNCipedia gene ID: lnc-GOLGA8J-3
Location (hg38): chr15:29674990-29679163
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2525 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000536835
Alternative gene names: ENSG00000256802; AC022613.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 73.6541 coding 
CPAT coding probability 25.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GOLGA8J-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GOLGA8J-3:1
3.1 lnc-GOLGA8J-3:2
4.0 lnc-GOLGA8J-3:2
4.1 lnc-GOLGA8J-3:2
5.0 lnc-GOLGA8J-3:2
5.1 lnc-SNRPN-99:6
5.2 lnc-GOLGA8J-3:2