Transcript: lnc-GOLGA8J-5:3

Basic information

LNCipedia transcript ID: lnc-GOLGA8J-5:3 
LNCipedia gene ID: lnc-GOLGA8J-5
Location (hg38): chr15:29823222-29825653
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 417 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023895; NONHSAT041309
Alternative gene names: XLOC_011197; linc-ARHGAP11B-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.7365 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8J-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GOLGA8J-2:1
3.1 lnc-GOLGA8J-2:2
4.0 lnc-GOLGA8J-2:2
4.1 lnc-GOLGA8J-2:2
5.0 lnc-GOLGA8J-2:2
5.1 lnc-SNRPN-101:3
5.2 lnc-GOLGA8J-5:3