Transcript: lnc-GOLGA8K-1:1

Basic information

LNCipedia transcript ID: lnc-GOLGA8K-1:1 
LNCipedia gene ID: lnc-GOLGA8K-1
Ensembl Gene ID: ENSG00000215304
Ensembl Transcript ID: ENST00000562108
Location (hg38): chr15:32398956-32435233
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1097 bp
Exons: 13
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562108.1; ULK4P1-001; OTTHUMT00000429843.1; NONHSAT041487
Alternative gene names: ENSG00000215304.2; ULK4P1; OTTHUMG00000175396.1; ENSG00000215304.3; RP13-395E19.3; AC135983.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 49.6441 non-coding 
CPAT coding probability 7.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GOLGA8K-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC139426.2-1:1
4.0 lnc-AC139426.2-1:1
4.1 lnc-AC139426.2-1:1
5.0 lnc-AC139426.2-1:1
5.1 lnc-OTUD7A-9:1
5.2 lnc-GOLGA8K-1:1