Transcript: lnc-GOLGA8M-1:1

Basic information

LNCipedia transcript ID: lnc-GOLGA8M-1:1 
LNCipedia gene ID: lnc-GOLGA8M-1
Ensembl Gene ID: ENSG00000261480
Ensembl Transcript ID: ENST00000568033
Location (hg38): chr15:28719377-28738431
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 557 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000568033.1; RP11-578F21.6-001; OTTHUMT00000431779.1; NONHSAT041261
Alternative gene names: ENSG00000261480.1; RP11-578F21.6; OTTHUMG00000176339.1; GOLGA8M


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.9034 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8M-1:1 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-578F21.5.1-1:1
4.0 lnc-RP11-578F21.5.1-1:1
4.1 lnc-RP11-578F21.5.1-1:1
5.0 lnc-RP11-578F21.5.1-1:1
5.1 lnc-GABRB3-21:1
5.2 lnc-GOLGA8M-1:1