Transcript: lnc-GOLGA8N-1:2

Basic information

LNCipedia transcript ID: lnc-GOLGA8N-1:2 
HGNC Gene Symbol: lnc-GOLGA8N-1    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2256
Ensembl Gene ID: ENSG00000261064
Ensembl Transcript ID: ENST00000561999
Location (hg38): chr15:32536714-32575643
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 366 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561999.1; RP11-1000B6.3-001; OTTHUMT00000429855.1; NONHSAT041504
Alternative gene names: ENSG00000261064.1; RP11-1000B6.3; OTTHUMG00000175400.1; LINC02256


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.5712 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8N-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1000B6.4.1-1:1
4.0 lnc-RP11-1000B6.4.1-1:1
4.1 lnc-RP11-1000B6.4.1-1:1
5.0 lnc-RP11-1000B6.4.1-1:1
5.1 lnc-SNRPN-139:2
5.2 lnc-GOLGA8N-1:2