Transcript: lnc-GOLGA8O-5:8

Basic information

LNCipedia transcript ID: lnc-GOLGA8O-5:8 
LNCipedia gene ID: lnc-GOLGA8O-5
Ensembl Gene ID: ENSG00000262728
Ensembl Transcript ID: ENST00000576873
Location (hg38): chr15:32606413-32615158
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 969 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000576873.2
Alternative gene names: ENSG00000262728.5; RP11-1000B6.8; AC123768.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.1442 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8O-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-632K20.1.1-5:3
4.1 lnc-RP11-632K20.1.1-5:3
5.0 lnc-RP11-632K20.1.1-5:3
5.1 lnc-OTUD7A-16:8
5.2 lnc-GOLGA8O-5:8