Transcript: lnc-GOLGA8Q-3:1

Basic information

LNCipedia transcript ID: lnc-GOLGA8Q-3:1 
LNCipedia gene ID: lnc-GOLGA8Q-3
Ensembl Gene ID: ENSG00000270055
Ensembl Transcript ID: ENST00000602663
Location (hg38): chr15:30487963-30490313
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2351 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT041361; ENST00000602663.1
Alternative gene names: ENSG00000270055.1; CTD-3092A11.2; AC127502.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.8719 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8Q-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC026150.9.1-3:1
4.0 lnc-AC026150.9.1-3:1
4.1 lnc-AC026150.9.1-3:1
5.0 lnc-AC026150.9.1-3:1
5.1 lnc-SNRPN-111:1
5.2 lnc-GOLGA8Q-3:1