Transcript: lnc-GOLGA8R-1:2

Basic information

LNCipedia transcript ID: lnc-GOLGA8R-1:2 
LNCipedia gene ID: lnc-GOLGA8R-1
Ensembl Gene ID: ENSG00000247728
Ensembl Transcript ID: ENST00000501830
Location (hg38): chr15:30616998-30625773
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 970 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000501830.2; RP11-932O9.7-001; OTTHUMT00000430725.1; NONHSAT041375
Alternative gene names: ENSG00000247728.2; RP11-932O9.7; OTTHUMG00000175655.1; AC091057.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.107 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8R-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-382B18.2.1-1:2
4.0 lnc-RP11-382B18.2.1-1:2
4.1 lnc-RP11-382B18.2.1-1:2
5.0 lnc-RP11-382B18.2.1-1:2
5.1 lnc-OTUD7A-25:2
5.2 lnc-GOLGA8R-1:2