Transcript: lnc-GPBP1-2:7

Basic information

LNCipedia transcript ID: lnc-GPBP1-2:7 
LNCipedia gene ID: lnc-GPBP1-2
Location (hg38): chr5:57570342-57617427
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1309 bp
Exons: 6
Sources: Refseq - Dec 2014
Alternative transcript names: NR_120607
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.8265 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPBP1-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPBP1-2:7
4.0 lnc-GPBP1-2:7
4.1 lnc-GPBP1-2:7
5.0 lnc-GPBP1-2:7
5.1 lnc-GPBP1-13:1
5.2 lnc-GPBP1-2:7