Transcript: lnc-GPCPD1-8:16

Basic information

LNCipedia transcript ID: lnc-GPCPD1-8:16 
LNCipedia gene ID: lnc-GPCPD1-8
Location (hg38): chr20:5490924-5504596
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 11239 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000205181.5|ENCT00000264560.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 35.0125 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPCPD1-8:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00654:20
5.0 LINC00654:20
5.1 lnc-RNF24-46:16
5.2 lnc-GPCPD1-8:16