Transcript: lnc-GPD2-1:4

Basic information

LNCipedia transcript ID: lnc-GPD2-1:4 
LNCipedia gene ID: lnc-GPD2-1
Location (hg38): chr2:156341813-156368429
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15919 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045207.1|ENCT00000231141.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 55.0283 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GPD2-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPD2-1:4
5.0 lnc-GPD2-1:4
5.1 lnc-KCNJ3-14:4
5.2 lnc-GPD2-1:4