Transcript: lnc-GPN2-2:2

Basic information

LNCipedia transcript ID: lnc-GPN2-2:2 
LNCipedia gene ID: lnc-GPN2-2
Location (hg38): chr1:26691859-26695935
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4077 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260063.1|MICT00000006219.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -76.9964 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPN2-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPN2-2:2
5.0 lnc-GPN2-2:2
5.1 lnc-GPATCH3-2:1
5.2 lnc-GPN2-2:2