Transcript: lnc-GPR146-1:1

Basic information

LNCipedia transcript ID: lnc-GPR146-1:1 
LNCipedia gene ID: lnc-GPR146-1
Ensembl Gene ID: ENSG00000225146
Ensembl Transcript ID: ENST00000418941
Location (hg38): chr7:1029025-1043891
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 535 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418941.1; AC073957.15-001; OTTHUMT00000322847.1; NONHSAT118684
Alternative gene names: ENSG00000225146.1; AC073957.15; OTTHUMG00000151482.1; AC073957.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.8645 non-coding 
CPAT coding probability 9.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR146-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR146-1:1
4.0 lnc-GPR146-1:1
4.1 lnc-GPR146-1:1
5.0 lnc-GPR146-1:1
5.1 lnc-GPER1-3:2
5.2 lnc-GPR146-1:1