Transcript: lnc-GPR148-2:9

Basic information

LNCipedia transcript ID: lnc-GPR148-2:9 
LNCipedia gene ID: lnc-GPR148-2
Location (hg38): chr2:130695975-130718831
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1170 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074371; FPKM1_group_17206_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.0385 non-coding 
CPAT coding probability 4.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR148-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEJ-2:10
4.0 lnc-GPR148-2:9
4.1 lnc-GPR148-2:9
5.0 lnc-GPR148-2:9
5.1 lnc-GPR17-46:9
5.2 lnc-GPR148-2:9