Transcript: lnc-GPR157-7:5

Basic information

LNCipedia transcript ID: lnc-GPR157-7:5 
LNCipedia gene ID: lnc-GPR157-7
RefSeq ID: NR_104623
Location (hg38): chr1:9425094-9428916
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2363 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104623; NR_104623.2
Alternative gene names: LOC100506022


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.7758 non-coding 
CPAT coding probability 14.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR157-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf200-4:4
4.0 lnc-C1orf200-4:4
4.1 lnc-C1orf200-4:4
5.0 lnc-C1orf200-4:4
5.1 lnc-CLSTN1-5:5
5.2 lnc-GPR157-7:5