Transcript: lnc-GPR180-2:1

Basic information

LNCipedia transcript ID: lnc-GPR180-2:1 
LNCipedia gene ID: lnc-GPR180-2
Location (hg38): chr13:94760941-94935406
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2890 bp
Exons: 5
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000505287
Alternative gene names: ENSG00000250280


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.312 non-coding 
CPAT coding probability 11.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR180-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR180-2:1
3.1 lnc-GPR180-2:1
4.0 lnc-GPR180-2:1
4.1 lnc-GPR180-2:1
5.0 lnc-GPR180-2:1
5.1 lnc-COL4A2-141:1
5.2 lnc-GPR180-2:1