Transcript: lnc-GPR27-10:10

Basic information

LNCipedia transcript ID: lnc-GPR27-10:10 
LNCipedia gene ID: lnc-GPR27-10
Location (hg38): chr3:71584255-71589467
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5213 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270562.1|HBMT00000977671.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.6911 non-coding 
CPAT coding probability 3.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR27-10:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPR27-10:10
5.0 lnc-GPR27-10:10
5.1 lnc-FAM19A1-18:8
5.2 lnc-GPR27-10:10