Transcript: lnc-GPR27-10:9

Basic information

LNCipedia transcript ID: lnc-GPR27-10:9 
LNCipedia gene ID: lnc-GPR27-10
Location (hg38): chr3:71583777-71587153
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3377 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270562.1|FTMT21200003407.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.464 non-coding 
CPAT coding probability 3.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR27-10:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPR27-10:9
5.0 lnc-GPR27-10:9
5.1 lnc-FAM19A1-18:7
5.2 lnc-GPR27-10:9