Transcript: lnc-GPR27-15:2

Basic information

LNCipedia transcript ID: lnc-GPR27-15:2 
LNCipedia gene ID: lnc-GPR27-15
Ensembl Gene ID: ENSG00000273461
Ensembl Transcript ID: ENST00000608555
Location (hg38): chr3:72061061-72068020
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 301 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608555.1; ENST00000608555.5
Alternative gene names: ENSG00000273461.1; RP11-398A8.4; ENSG00000273461.5; AC105265.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.2927 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR27-15:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR27-15:2
4.0 lnc-GPR27-15:2
4.1 lnc-GPR27-15:2
5.0 lnc-GPR27-15:2
5.1 lnc-FAM19A1-31:2
5.2 lnc-GPR27-15:2