Transcript: lnc-GPR39-4:3

Basic information

LNCipedia transcript ID: lnc-GPR39-4:3 
LNCipedia gene ID: lnc-GPR39-4
RefSeq ID: NR_110294
Location (hg38): chr2:133266195-133284758
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 531 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110294; NR_110294.1
Alternative gene names: LOC101928161


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.0998 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR39-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR39-4:3
4.0 lnc-GPR39-4:3
4.1 lnc-GPR39-4:3
5.0 lnc-GPR39-4:3
5.1 lnc-GPR17-86:3
5.2 lnc-GPR39-4:3