Transcript: lnc-GPR65-2:11

Basic information

LNCipedia transcript ID: lnc-GPR65-2:11 
LNCipedia gene ID: lnc-GPR65-2
Ensembl Gene ID: ENSG00000259061
Ensembl Transcript ID: ENST00000554181
Location (hg38): chr14:86936640-86989125
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 412 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554181; ENST00000554181.1; RP11-736P16.1-001; OTTHUMT00000413099.2; NONHSAT038145
Alternative gene names: ENSG00000259061; RP11-736P16.1; ENSG00000259061.1; OTTHUMG00000171351.2; AL358292.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.6722 non-coding 
CPAT coding probability 1.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR65-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-322L20.1.1-2:1
3.1 lnc-RP11-322L20.1.1-2:1
4.0 lnc-RP11-322L20.1.1-2:1
4.1 lnc-RP11-322L20.1.1-2:1
5.0 lnc-RP11-322L20.1.1-2:1
5.1 lnc-GPR65-2:10
5.2 lnc-GPR65-2:11