Transcript: lnc-GPR89B-3:5

Basic information

LNCipedia transcript ID: lnc-GPR89B-3:5 
LNCipedia gene ID: lnc-GPR89B-3
Location (hg38): chr1:148162877-148163840
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 761 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT006068; ENST00000594189.1
Alternative gene names: ENSG00000232265.3; XXyac-YX155B6.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.8844 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR89B-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR89B-3:5
4.0 lnc-GPR89B-3:5
4.1 lnc-GPR89B-3:5
5.0 lnc-GPR89B-3:5
5.1 lnc-FCGR1A-27:7
5.2 lnc-GPR89B-3:5