Transcript: lnc-GPX5-5:1

Basic information

LNCipedia transcript ID: lnc-GPX5-5:1 
LNCipedia gene ID: lnc-GPX5-5
Location (hg38): chr6:28720497-28721493
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 997 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083389.1|ENCT00000370689.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.5236 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPX5-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPX5-5:1
5.0 lnc-GPX5-5:1
5.1 lnc-OR2I1P-41:1
5.2 lnc-GPX5-5:1