Transcript: lnc-GPX6-3:1

Basic information

LNCipedia transcript ID: lnc-GPX6-3:1 
LNCipedia gene ID: lnc-GPX6-3
Location (hg38): chr6:28593408-28597535
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 476 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3152_chr6:28561184-28565312_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.9722 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPX6-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPX6-3:1
4.0 lnc-GPX6-3:1
4.1 lnc-GPX6-3:1
5.0 lnc-GPX6-3:1
5.1 lnc-SFTA2-66:1
5.2 lnc-GPX6-3:1