Transcript: lnc-GRAP-6:3

Basic information

LNCipedia transcript ID: lnc-GRAP-6:3 
LNCipedia gene ID: lnc-GRAP-6
Location (hg38): chr17:19171450-19172091
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 392 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000476856.1; AC007952.4-002; OTTHUMT00000132157.2; NONHSAT146439
Alternative gene names: ENSG00000266311.1; AC007952.4; OTTHUMG00000178492.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.5937 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRAP-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007952.6.1-1:3
4.0 lnc-AC007952.2.1-1:5
4.1 lnc-AC007952.2.1-1:5
5.0 lnc-AC007952.2.1-1:5
5.1 lnc-B9D1-9:3
5.2 lnc-GRAP-6:3