Transcript: lnc-GRAPL-6:3

Basic information

LNCipedia transcript ID: lnc-GRAPL-6:3 
LNCipedia gene ID: lnc-GRAPL-6
Ensembl Gene ID: ENSG00000281856
Ensembl Transcript ID: ENST00000631194
Location (hg38): chr17:19219143-19220473
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1173 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631194.1
Alternative gene names: ENSG00000281856.1; RP11-744A16.4; AC106017.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.6831 non-coding 
CPAT coding probability 62.30% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GRAPL-6:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC106017.3.1-1:3
4.1 lnc-AC106017.3.1-1:3
5.0 lnc-AC106017.3.1-1:3
5.1 lnc-GLP2R-153:3
5.2 lnc-GRAPL-6:3