Transcript: lnc-GRHL2-12:7

Basic information

LNCipedia transcript ID: lnc-GRHL2-12:7 
LNCipedia gene ID: lnc-GRHL2-12
Location (hg38): chr8:101205988-101209249
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3262 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271882.1|FTMT23200005191.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.5955 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRHL2-12:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GRHL2-12:7
5.0 lnc-GRHL2-12:7
5.1 lnc-CA2-177:5
5.2 lnc-GRHL2-12:7